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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821011.1_cds_XP_016500606.1_14417
CDS Infomation

[gene=LOC107819044] [db_xref=GeneID:107819044] [protein=proline-rich receptor-like protein kinase PERK1] [protein_id=XP_016500606.1] [location=complement(join(18234..18443,18552..18713,18840..18987,19103..19179,19355..19425,19532..19618,19868..20413,20665..21388))] [gbkey=CDS]
Sequence

ATGGATTCATCTCCTGATACTGCTTCCTCCGATAATAGTACTGATTCTAGTTCTAGCAAG
AGTAGCCCTCCTTCTTCAGATGGACCTCCACCATCTTCACCTTCTTCAGATTCATCTTCA
TCTTCATCACCACCGAAAAATGATTCTACTCCTTCATCTCCACCACCAAAAGATGAATCT
CCTCCGTCGTCACCGCCAACACAATCTCCTCCTCCTTCCCCTGATGCACCACCCCCGAAA
AACGATTCTCCTCCACCAGCATCTCCACCACCCAAAGATGATCAATCTTCTCCATCACCA
CCAAAAGATGATAATAACCAATCTCCTCAATCTCCTCAATCCCCTCCTCCTTCACAATCA
CCACCTGTACAATCTCCTCCGCCATCATCAAACACTACACCATCACCACCTGCTCCTAAG
AATCCGTCACCTGTATTTTCTCCACCACTTCCTGTTTCTTCACAATCACCTCCAGCTCCT
CATGCAGCAGCACATTTGTCTCCTCCTCCACACTCTGGACCCGATCGACCATCAGATAAA
CCACCTGGTTCCTCAGGGAACAACGGTTCGACACCTTCCCCTGATTCTGATTCCTCCTCA
AATAATGTGGCTGTAATAGCTGGACTTGCCGTAGGCGGCTTATTAGTTATTGTGGTTATC
GTTCTATGTGTATGGTGTAATAAAAGGAAGAAGAAGCAGAGATACTATATGGGTCCACCT
AAAGGAAGTGATCAATATGAAAATTATAACAGTCAGTGGAACAGACGTCAGTCTATGGGG
GATCACGTCATGAAGGTACCGCAGGGTGAAATGGGGATTCCTCAAGGTGGTTGGGCTGCA
GCTACTCAACATCAGGCAACTAATTCAAGCAGCGAATTCGGCTCAGGTTTTTCAGGACAA
GCGCCAGGCCAAGGGCCATTGCCTCCTCAATCACCTAACATGGGTGGACTTGGTGGTTTC
TCTCAAAGCCAATTCAGTTATGAGGAGTTAGCGAAGGCTACAGATGGATTTTCTCATGCC
AATCTGTTAGGCCAAGGTGGTTTCGGGTACGTGCACAAAGGTATTTTGACTGATGGAAGA
GAGGTTGCTATCAAGAGTTTGAAAGCAGGTAGTGGACAAGGCGAACGAGAATTCCAGGCT
GAGGTTGAGATCATTAGCAGAGTTCATCATCGTCATCTTGTGTCCCTTGTTGGATATTGC
ATTGCTAATGGACAGCGCATGTTGGTTTATGAATTTGTTGACAACAAAACCTTGGAGTTC
CACCTTCATGGGAAAGGTCAACCTGTCATGGATTGGGAAACCAGACTTAAAATTGCTTTG
GGATCAGCCAAGGGTCTGGCTTACCTCCATGAAGATTGCCAACATAGAATTATCCATCGC
GATATCAAGGCTGCAAACATTCTACTAGACTACAATTATGAAGCCTTGGTGGCAGATTTC
GGATTGGCTAAGCTTACTTCTGACAACAATACTCATGTGTCGACTCGTGTTATGGGAACA
TTCGGGTACTTGGCTCCTGAATATGCATCCAGTGGAAAGCTAACAGAGAAATCAGATGTA
TTTTCATATGGAGTCATGCTGTTGGAACTCATAACCGGGAGGCGACCTGTTGATCCTAAT
GATAAATACATGGAAGACAGCTTAGTAGATTGGGCTAGGCCGCTTCTTACAAGAGCACTA
GAAGAGGGAGTATATGACGGATTGGTAGACGTGCGCCTTGAAGGAAACTATGATACAGAT
GAGCTACATCGCATGGTAGCCTGTGCTGCTGCTAGCATTCGCCATTCTGCTAAAAGACGC
CCTAAAATGAGCCAGATTGTACGTACCTTAGAAGGCAATGCATCGTTGGAGGACTTGAAC
GATAGTGCAAGACCTGGAAAAACACCTAGCTTTGCGGCCTCAAGCGGGGTGACCCAGGCC
TATGATACTGCTATGTATAATGCTGACATGATGAAATTCAGGAAAATGGTTATGACAACC
CAAGAATTCAATAACGGTGAACATGGAAAACCTCCAAGTGAGTAA

Peptide Sequence

PEP ID

XP_016500606.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK1 [Nicotiana tabacum]
Sequence

MDSSPDTASSDNSTDSSSSKSSPPSSDGPPPSSPSSDSSSSSSPPKNDSTPSSPPPKDES
PPSSPPTQSPPPSPDAPPPKNDSPPPASPPPKDDQSSPSPPKDDNNQSPQSPQSPPPSQS
PPVQSPPPSSNTTPSPPAPKNPSPVFSPPLPVSSQSPPAPHAAAHLSPPPHSGPDRPSDK
PPGSSGNNGSTPSPDSDSSSNNVAVIAGLAVGGLLVIVVIVLCVWCNKRKKKQRYYMGPP
KGSDQYENYNSQWNRRQSMGDHVMKVPQGEMGIPQGGWAAATQHQATNSSSEFGSGFSGQ
APGQGPLPPQSPNMGGLGGFSQSQFSYEELAKATDGFSHANLLGQGGFGYVHKGILTDGR
EVAIKSLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIANGQRMLVYEFVDNKTLEF
HLHGKGQPVMDWETRLKIALGSAKGLAYLHEDCQHRIIHRDIKAANILLDYNYEALVADF
GLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDPN
DKYMEDSLVDWARPLLTRALEEGVYDGLVDVRLEGNYDTDELHRMVACAAASIRHSAKRR
PKMSQIVRTLEGNASLEDLNDSARPGKTPSFAASSGVTQAYDTAMYNADMMKFRKMVMTT
QEFNNGEHGKPPSE

Transcript Sequence

Gene sequence data has not been registered.